CDS

Accession Number TCMCG007C50963
gbkey CDS
Protein Id XP_009110919.2
Location join(21983044..21983169,21983303..21983414,21983494..21983577,21983667..21983930,21984004..21984132,21984428..21984486,21984580..21984687,21984790..21985197,21985291..21985343,21985430..21985471,21985566..21985704,21985806..21985871)
Gene LOC103836417
GeneID 103836417
Organism Brassica rapa

Protein

Length 529aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009112671.2
Definition probable NOT transcription complex subunit VIP2 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category DK
Description NOT2 / NOT3 / NOT5 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12605        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0015074        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATGGGCTTCAGCTGCACTCAACCATGTTTACAGTTAAGTGTTTCTTGATCCATCTGCTTACGTTCTTTTCTTCCTTCGTTTCAGGTCAATCAACCATTTGCAAAATGTCATCTTGTTCTAACTCGACGTCATCACTCACCGGTTCTACTTCGAGTGTACCAGACGGTTCAGGGAGAACGTTCACTCCTTTCTTTCCTCAGTTTGGGTCGATGTCTCCTGTTTTAAACCCTGATGGAACTCTCCAGGGCGTTTATGATGTTAAAGACCACATTTTTTTTCCCACCTCGAATGTTTCCCGCGCTGGACCGAGAAACTCAGTTTTTGGAGCTCCAATTTTGGTAAATGCCACCAGCTCTCGAGCACCACCACCACCGAGCTCTATGGGGAATACGGCTGGTGGAGTCTCAATGAGCAGAGCTTTGGTCTTTGATGGAGGAAGTATACTGAGCTCTACGGGGAGTATGGCTGGTGGAGGCTTAATGAGCAGGGCTTTGATCTCTGATGGAGGAAGTATAATGAGCTCTATAGGGAGTATGGATGGAAGTACTAAACATAATAGATCAATGATGATTGGGCTCCACGGATCCCCACAGGTTTATTCTATGCCTGGAAGCTCTTATCCTTCTGCTGCTGGAGAACATTCCCAAACTCATGTTCAAGCAATGAACAGCCTAAGCTCTATGAGCTTAATGAACTCCAACTACATGACAACTGATTATCAAATGGATTTGCATCAGCAAGAACTAATGATGCAATCTCAACAGTCATCTATGAGGAGGCATGGTGGATTTTACTTTGGTGATGCGTCTATGCCAACATATCCTCTACAACTACCAAGTGCTCAAGCTGTGAGCCGTAGTGGTGTTTTCTTCTCTCAGACTGGTGGACCTCCGACTATTGGATCAAGATCTGTGAATGCTGCAACGGGTTATGACGACCAGCCCCTCCGGCACCATCAGAACACGTCCCAGTTTGGCGGGGAGAAGCTACCAGCTATTGGCCAACCCATCAGAGACGTGGGATCACAACCAACGCAAGCGGCGACGCAGTCCACTCCTGACCCTTTTAGCATGCTAGGTTTGGTTAATGTGATTAACCAGACCAACCCTGACGTGACTACTTTGGCACTTGGGGTTGACTTGCAGGAAATTGGGTTAGATATGACCTCAAAAGAAAAACTTTTCAAGACTTTCGCCTCGCCTTGGGCTAATGAACCCCTTAAAGAGGATCATGAACACTTCGATCTACCGCAGTGTTACAACGGAGTACAAGTACCACCTCCAAATCAAGGGATGTTTAGAAGGTTTGACATGAACACATTGTTTTACATATTTTATAGCATGCCGAATGATGAGGCGCAGCTATACGCAGCTAATGAACTTAACAACAGGTACTGGTTCTACCACAAAGAACACAAGTGTTGGTTCAAACGAACTGGGATACCTCTCGTGCAAACAAATGCTTATGAAAGAGGAACATATGACTGTTTTGATCCAGACAAATTTGAGACCGTTCAAAAGGAAAATTTTGTTATTTATTATGAGATGCTGGAAAGGAGGCCGTCTCTACCTCAACACCGAGTGTAA
Protein:  
MYGLQLHSTMFTVKCFLIHLLTFFSSFVSGQSTICKMSSCSNSTSSLTGSTSSVPDGSGRTFTPFFPQFGSMSPVLNPDGTLQGVYDVKDHIFFPTSNVSRAGPRNSVFGAPILVNATSSRAPPPPSSMGNTAGGVSMSRALVFDGGSILSSTGSMAGGGLMSRALISDGGSIMSSIGSMDGSTKHNRSMMIGLHGSPQVYSMPGSSYPSAAGEHSQTHVQAMNSLSSMSLMNSNYMTTDYQMDLHQQELMMQSQQSSMRRHGGFYFGDASMPTYPLQLPSAQAVSRSGVFFSQTGGPPTIGSRSVNAATGYDDQPLRHHQNTSQFGGEKLPAIGQPIRDVGSQPTQAATQSTPDPFSMLGLVNVINQTNPDVTTLALGVDLQEIGLDMTSKEKLFKTFASPWANEPLKEDHEHFDLPQCYNGVQVPPPNQGMFRRFDMNTLFYIFYSMPNDEAQLYAANELNNRYWFYHKEHKCWFKRTGIPLVQTNAYERGTYDCFDPDKFETVQKENFVIYYEMLERRPSLPQHRV